PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008219101.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 199aa    MW: 22155.1 Da    PI: 5.8875
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008219101.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-191665255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  XP_008219101.1 16 RYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEEPEMAAAAYDAAALHLRG 65
                    69****999.**********8...557*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.71E-211575No hitNo description
SuperFamilySSF541713.14E-211674IPR016177DNA-binding domain
SMARTSM003803.3E-351679IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-291674IPR001471AP2/ERF domain
PfamPF008473.0E-121665IPR001471AP2/ERF domain
PROSITE profilePS5103223.1691673IPR001471AP2/ERF domain
PRINTSPR003677.1E-121728IPR001471AP2/ERF domain
PRINTSPR003677.1E-125575IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MEPPAADCHH FPSSARYRGV RKRKWGKWVS EIREPGKKTR IWLGSYEEPE MAAAAYDAAA  60
LHLRGRGGVL NFPELVDSLP RPASSSPMDV QLAAQEAALR VRRLRMGAVS TEAVGGSSSP  120
RGLSSMPVTV GLSPSQIQAI NESPLDSPKL WMQYMYRAHC HEGLSLLGDD MSCVEYHDEE  180
VELEECENMQ HLSIWDSYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-161778668ATERF1
3gcc_A3e-161778668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008219101.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008219101.11e-146PREDICTED: ethylene-responsive transcription factor ERF022-like
SwissprotQ9LQ281e-48ERF22_ARATH; Ethylene-responsive transcription factor ERF022
TrEMBLA0A314UEF11e-132A0A314UEF1_PRUYE; Ethylene-responsive transcription factor ERF022
STRINGXP_008219101.11e-145(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.17e-49ERF family protein