PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008219092.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 166aa    MW: 18002.8 Da    PI: 5.7015
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008219092.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.97.8e-161867255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++kGVr++k +g+Wv+eIr+p   g +  r +lg+f ++e Aa a++ a  +l+ 
  XP_008219092.1 18 KFKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSSPEAAAVARDVAYYCLRR 67
                    89******9.**********8...3.35***********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.3E-231777IPR001471AP2/ERF domain
CDDcd000181.67E-221877No hitNo description
SMARTSM003803.5E-251883IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-161878IPR016177DNA-binding domain
PROSITE profilePS5103219.9541877IPR001471AP2/ERF domain
PfamPF008473.3E-71866IPR001471AP2/ERF domain
PRINTSPR003679.5E-81930IPR001471AP2/ERF domain
PRINTSPR003679.5E-84157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MSYSSEESSS SPGTGQRKFK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFSS PEAAAVARDV  60
AYYCLRRPST LEGLNFPLVL PSSVHADMSP RSIQKAASDA GMAVDAQLVA NRSPQAGGRQ  120
SYNGSHGVES EVWEDMGESS RNNWGGHMGS GNGCEDLSIS IEDYDL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008219092.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008219092.11e-120PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotO805428e-44ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A314Y2K11e-107A0A314Y2K1_PRUYE; Ethylene-responsive transcription factor ERF020
STRINGXP_008219092.11e-119(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.19e-46ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]