PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00053751-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family VOZ
Protein Properties Length: 123aa    MW: 13832.7 Da    PI: 7.4141
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00053751-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ221.52e-68212236156
               VOZ  36 tlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrs 128
                       tla neg+pg++pvlrp+gid+kdg+lfaals k+q k vgipecega+takspwna elfd+ +lege++re lffdkprr fesgnrkqrs
  PSME_00053751-RA   2 TLASNEGAPGMRPVLRPEGIDMKDGPLFAALSVKTQEKAVGIPECEGATTAKSPWNAYELFDMYVLEGESMRECLFFDKPRRDFESGNRKQRS 94 
                       79******************************************************************************************* PP

               VOZ 129 lpdysgrgwhesrkqvmkefgglkrsyy 156
                       lpdysg gwhesrkqv+k+fgglkrsy 
  PSME_00053751-RA  95 LPDYSGHGWHESRKQVIKDFGGLKRSYS 122
                       **************************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MTLASNEGAP GMRPVLRPEG IDMKDGPLFA ALSVKTQEKA VGIPECEGAT TAKSPWNAYE  60
LFDMYVLEGE SMRECLFFDK PRRDFESGNR KQRSLPDYSG HGWHESRKQV IKDFGGLKRS  120
YSV
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010904889.14e-64transcription factor VOZ1
SwissprotQ9SGQ07e-58VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A0K9NP508e-64A0A0K9NP50_ZOSMR; Vascular plant one zinc finger protein
TrEMBLA0A199VTN33e-64A0A199VTN3_ANACO; Transcription factor VOZ1
STRINGERN140214e-63(Amborella trichopoda)
STRINGXP_008782092.16e-63(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.23e-60vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]