PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00049775-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family VOZ
Protein Properties Length: 254aa    MW: 28622.7 Da    PI: 6.61
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00049775-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ399.38.5e-123312471217
               VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                       ppp+aflgpkcalwdc rpaqg++w+qdycs fh tla neg+pg+ pvlrp+gidlkdg+lfaalsak+q k vgi eceg atakspwna 
  PSME_00049775-RA  31 PPPAAFLGPKCALWDCLRPAQGTKWCQDYCSDFHMTLASNEGAPGMIPVLRPRGIDLKDGPLFAALSAKTQEKAVGIHECEGDATAKSPWNAY 123
                       89******************************************************************************************* PP

               VOZ  94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrle 186
                       elfd+ +lege++rew+ffdkpr afesgnrkq sl dysgrgwhesrkqv+k+fgglkrsyymdp ps++fewhlyeyein++da+alyrle
  PSME_00049775-RA 124 ELFDMYVLEGESMREWIFFDKPRWAFESGNRKQCSLLDYSGRGWHESRKQVIKDFGGLKRSYYMDPHPSTQFEWHLYEYEINDCDACALYRLE 216
                       ********************************************************************************************* PP

               VOZ 187 lklvdekksakgkvskdsladlqkklgrlta 217
                       lk+v +kk++kgkv  d+l+dlq++lg+l+a
  PSME_00049775-RA 217 LKMVCSKKNTKGKVGGDPLVDLQHQLGKLSA 247
                       *****************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
DYIPAAKPIF TLTGKEETSP VFNGPHPGLC PPPAAFLGPK CALWDCLRPA QGTKWCQDYC  60
SDFHMTLASN EGAPGMIPVL RPRGIDLKDG PLFAALSAKT QEKAVGIHEC EGDATAKSPW  120
NAYELFDMYV LEGESMREWI FFDKPRWAFE SGNRKQCSLL DYSGRGWHES RKQVIKDFGG  180
LKRSYYMDPH PSTQFEWHLY EYEINDCDAC ALYRLELKMV CSKKNTKGKV GGDPLVDLQH  240
QLGKLSADFS WVAK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010657013.11e-125PREDICTED: transcription factor VOZ1
RefseqXP_019079230.11e-125PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ01e-117VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA5CA221e-123A5CA22_VITVI; Uncharacterized protein
TrEMBLF6H4X21e-123F6H4X2_VITVI; Uncharacterized protein
STRINGVIT_12s0028g02670.t011e-124(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-119vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]