PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00045142-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family VOZ
Protein Properties Length: 265aa    MW: 29563.6 Da    PI: 5.1755
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00045142-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ175.52.4e-54701711102
               VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                       ppp+aflgpkcalwdc+rpaqg++w+qdycs fh tla neg+pg++pvlrp+gidlkdg+lfa+lsak+q k vgipecegaatakspwna 
  PSME_00045142-RA  70 PPPAAFLGPKCALWDCSRPAQGTKWCQDYCSDFHMTLASNEGAPGMRPVLRPGGIDLKDGPLFATLSAKTQEKVVGIPECEGAATAKSPWNAY 162
                       89******************************************************************************************* PP

               VOZ  94 elfdlslle 102
                       elfd+  le
  PSME_00045142-RA 163 ELFDMYELE 171
                       ****98776 PP

2VOZ150.31.3e-46170258129217
               VOZ 129 lpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                       l dysgrgwhesrkqv+k+fgglkrsyymdpqps++fewhlyeyein +da+alyrlelk+v +kk++kgkv  d+l+dlq++lg+l+a
  PSME_00045142-RA 170 LEDYSGRGWHESRKQVIKDFGGLKRSYYMDPQPSTQFEWHLYEYEINYCDACALYRLELKMVCSKKNTKGKVGGDPLVDLQHQLGKLSA 258
                       88*************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MMWKSTYTLT NLKEKLPPNL VEGLEVTSGL EGGQTNFHQD YIPAAQPIFT LTGEEETSPV  60
FNGPQPGLCP PPAAFLGPKC ALWDCSRPAQ GTKWCQDYCS DFHMTLASNE GAPGMRPVLR  120
PGGIDLKDGP LFATLSAKTQ EKVVGIPECE GAATAKSPWN AYELFDMYEL EDYSGRGWHE  180
SRKQVIKDFG GLKRSYYMDP QPSTQFEWHL YEYEINYCDA CALYRLELKM VCSKKNTKGK  240
VGGDPLVDLQ HQLGKLSAEF SWVAK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010260370.11e-108PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ02e-98VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A1U8A0G41e-107A0A1U8A0G4_NELNU; transcription factor VOZ1
STRINGXP_010260370.11e-108(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-101vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]