PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00036373-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family VOZ
Protein Properties Length: 427aa    MW: 48310.4 Da    PI: 5.3283
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00036373-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ4051.6e-1241123281217
               VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                       ppp+aflgpkcalwdc rpaqg++w+qdy s fh +la neg+p ++pvlrp+gidlkdg+lfaalsak+q k vgipecega+takspwna 
  PSME_00036373-RA 112 PPPAAFLGPKCALWDCLRPAQGTKWCQDYYSDFHMNLASNEGAPRMRPVLRPRGIDLKDGPLFAALSAKTQEKAVGIPECEGATTAKSPWNAY 204
                       89******************************************************************************************* PP

               VOZ  94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrle 186
                       e+fd+ +lege++rewlffdkprrafesgnrkqrslpdysgr whesrkqv+k+fgglkrsyymdpqps++fewhlyeyein++da+alyrle
  PSME_00036373-RA 205 EIFDMYVLEGESMREWLFFDKPRRAFESGNRKQRSLPDYSGRSWHESRKQVIKDFGGLKRSYYMDPQPSTQFEWHLYEYEINDCDACALYRLE 297
                       ********************************************************************************************* PP

               VOZ 187 lklvdekksakgkvskdsladlqkklgrlta 217
                       lk+v +kk++kgkv  d+l+dlq++lg+l+a
  PSME_00036373-RA 298 LKMVCSKKNTKGKVGGDPLVDLQHQLGKLSA 328
                       *****************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
DFLVDDLHTP EKDFEKVSRC TNIGEGLHQN SYPQTSVQLP ANIEHQENNN YVQTSEQFPP  60
NLVEGLEVTS GLEGGQINFH QDYIPAAQPI FTLTGEEETS PVFNGPQPGL CPPPAAFLGP  120
KCALWDCLRP AQGTKWCQDY YSDFHMNLAS NEGAPRMRPV LRPRGIDLKD GPLFAALSAK  180
TQEKAVGIPE CEGATTAKSP WNAYEIFDMY VLEGESMREW LFFDKPRRAF ESGNRKQRSL  240
PDYSGRSWHE SRKQVIKDFG GLKRSYYMDP QPSTQFEWHL YEYEINDCDA CALYRLELKM  300
VCSKKNTKGK VGGDPLVDLQ HQLGKLSAEF SWNGSNYTYS ASTQVAPIGK SLLMGHECSM  360
VILSKKQVDA MQLNDKRELT KYSTLYNYSI YFKEMIDALP TISNAIIKGI MEFDANSFAP  420
FQQASRY
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010260370.11e-132PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ01e-120VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A1U8A0G41e-130A0A1U8A0G4_NELNU; transcription factor VOZ1
STRINGXP_010260370.11e-131(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-122vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]