PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00004678-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family VOZ
Protein Properties Length: 238aa    MW: 26136.3 Da    PI: 4.1907
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00004678-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ150.11.4e-46141234194
               VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                       ppp aflgpkc lwdc+rpaqgs+w+qdycs+fh ++alneg+pg+ pvlrp+gidlkdgllf+al ak+  k  gi ecegaat+kspwna+
  PSME_00004678-RA 141 PPPKAFLGPKCPLWDCPRPAQGSDWCQDYCSNFHGMVALNEGPPGMGPVLRPGGIDLKDGLLFSALGAKTVVKYGGILECEGAATKKSPWNAP 233
                       89******************************************************************************************9 PP

               VOZ  94 e 94 
                        
  PSME_00004678-RA 234 G 234
                       6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MVEASLCSSD LSCDMWSLLQ LHEEEDDATS ILATPYNSKL QLNENTLEAA NPSSFQEAIP  60
PSEMRKDFYV DHADAEAQNI DETSRSENIH TESLLQTTDE GLEAVAQMNQ YFDHNLCLSL  120
DPEVEEEHIP KFQGPCPRIY PPPKAFLGPK CPLWDCPRPA QGSDWCQDYC SNFHGMVALN  180
EGPPGMGPVL RPGGIDLKDG LLFSALGAKT VVKYGGILEC EGAATKKSPW NAPGMGYK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010657013.16e-60PREDICTED: transcription factor VOZ1
RefseqXP_019079230.16e-60PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ06e-52VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A438EGC11e-61A0A438EGC1_VITVI; Transcription factor VOZ1
STRINGERN140218e-59(Amborella trichopoda)
STRINGVIT_12s0028g02670.t018e-59(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.23e-54vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]