PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf15726g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 144aa    MW: 16137.5 Da    PI: 5.2915
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf15726g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.5e-2084134255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  Peinf101Scf15726g00001.1  84 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDKAAYRMRG 134
                               7********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.7E-3383143IPR001471AP2/ERF domain
PfamPF008476.3E-1584134IPR001471AP2/ERF domain
SMARTSM003803.8E-3484144IPR001471AP2/ERF domain
CDDcd000185.83E-3184143No hitNo description
PROSITE profilePS5103224.36884142IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-2384143IPR016177DNA-binding domain
PRINTSPR003672.5E-118596IPR001471AP2/ERF domain
PRINTSPR003672.5E-11108124IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MSCLTETWGD LPLKVDDSED MVIYGLLRDA LNIGWTPLNL TDSTEVKAEP REETEPAMGL  60
APSMALEFVA PPMETTMAPP VKRHYRGVRQ RPWGKFAAEI RDPAKNGARV WLGTYETAEE  120
AALAYDKAAY RMRGSKALLN FPHR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-3583144465ATERF1
3gcc_A1e-3583144465ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB8281542e-51AB828154.1 Nicotiana tabacum ERF32 mRNA for ethylene response factor 32, complete cds.
GenBankTOBBY4D2e-51D38126.1 Nicotiana tabacum EREBP-2 mRNA for ethylene-responsive element binding protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765938.13e-78PREDICTED: ethylene-responsive transcription factor 2
RefseqXP_016469246.14e-78PREDICTED: ethylene-responsive transcription factor 2
SwissprotQ9LW503e-79ERF2_NICSY; Ethylene-responsive transcription factor 2
TrEMBLA0A0U1Z1U92e-78A0A0U1Z1U9_LYCCN; Ethylene-responsive transcription factor
STRINGXP_009765938.11e-77(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40542245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.19e-43ethylene responsive element binding factor 2