PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf12366g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 354aa    MW: 39275.6 Da    PI: 4.5162
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf12366g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.6e-1980130155
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                               + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa a+++a+++++g
  Peinf101Scf12366g00002.1  80 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 130
                               56*****999.**********8...3.35************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-1380130IPR001471AP2/ERF domain
CDDcd000189.65E-3180139No hitNo description
PROSITE profilePS5103221.35181138IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-2081138IPR016177DNA-binding domain
SMARTSM003801.0E-3581144IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-3181139IPR001471AP2/ERF domain
PRINTSPR003671.2E-98293IPR001471AP2/ERF domain
PRINTSPR003671.2E-9104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MTILDQAPKM DSLPLDYARK RKSRRRGGTK NVAETLAKWK EYNQKLDTVD DEGKPIRKVP  60
AKGSKKGCMK GKGGPDNSRC NYRGVRQRTW GKWVAEIREP NRGSRLWLGT FPTAIEAALA  120
YDEAARAMYG PCARLNLPNY PSSRESSKDD SSWATTSVSD STAGSSYSEV CPAGEMNDTF  180
ETKYEDGDGE SRIDGAAALH EAGTPLSSVK EEDGAAGLIA KMDIVEAKEE PRSIDQDMLK  240
SGRDYLDNIN WDEMFDVEEL LGMLNSTGGA PASNQDFGPI ASQKEQYMYN NNQLSDPSFQ  300
QHVDYKVLGD TQPMEQQPPI VDYGFEFLKP GRQEDLNFCL DDLALLDLDS EFGV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1681138260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009612863.11e-161PREDICTED: dehydration-responsive element-binding protein 2C-like
RefseqXP_016460453.11e-161PREDICTED: dehydration-responsive element-binding protein 2C-like
TrEMBLA0A1S3Z7S51e-160A0A1S3Z7S5_TOBAC; dehydration-responsive element-binding protein 2C-like
STRINGXP_009612863.11e-161(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-39ERF family protein