PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03816g00011.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 229aa    MW: 25424.9 Da    PI: 4.5072
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03816g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.5e-182676256
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                              +y+GVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+ge
  Peinf101Scf03816g00011.1 26 KYRGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRGE 76
                              8*****999.**********933...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.42E-292585No hitNo description
PfamPF008471.7E-102676IPR001471AP2/ERF domain
PROSITE profilePS5103221.5092683IPR001471AP2/ERF domain
SMARTSM003803.9E-342689IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-292684IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-202684IPR016177DNA-binding domain
PRINTSPR003676.8E-102738IPR001471AP2/ERF domain
PRINTSPR003676.8E-104965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MVKPERQTCN QDSCTLAQSS SSSSAKYRGV RKRKWGKYVS EIRLPNSRER IWLGSYDTAE  60
KAARAFDAAL FCLRGETAKF NFPNNPPDIL NGRSMTPAEI QVAAAQYANT DTDAGVPISN  120
WNPRDNSDPS SSLSSSSEMF RAESPSVSVS GGVVQETEKT EMALENGFVD MFSSMGTTNN  180
VYDFGIFPGF DDFSGDYYVP PMPNVDTVEE NYHNYDGFHL QGSSFLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-181784573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624342.11e-115PREDICTED: ethylene-responsive transcription factor ERF017
TrEMBLA0A1S3XUX51e-113A0A1S3XUX5_TOBAC; ethylene-responsive transcription factor ERF017-like
TrEMBLA0A1S4C6K11e-113A0A1S4C6K1_TOBAC; ethylene-responsive transcription factor ERF017-like
TrEMBLA0A1U7V4E61e-113A0A1U7V4E6_NICSY; ethylene-responsive transcription factor ERF017
STRINGXP_009624342.11e-114(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-56ERF family protein