PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02481g00009.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ZF-HD
Protein Properties Length: 90aa    MW: 9784.81 Da    PI: 8.3853
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02481g00009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.99e-322275259
               ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                              ++vrY eC+kNhAas+Gg++vDGC+Efmps     t+ +l+CaACgCHRnFHR+eve+
  Peinf101Scf02481g00009.1 22 RTVRYVECQKNHAASVGGYVVDGCREFMPS----ETPGTLTCAACGCHRNFHRKEVES 75
                              579**************************9....4689*****************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257741.0E-172474IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047707.6E-282473IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015662.9E-262573IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152324.1672672IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MKKVLRRNDS SRNSTNSSFT ARTVRYVECQ KNHAASVGGY VVDGCREFMP SETPGTLTCA  60
ACGCHRNFHR KEVESDVASD CTSASSTSTT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001234189.18e-49mini zinc finger protein
SwissprotQ9LJW52e-30MIF2_ARATH; Mini zinc finger protein 2
TrEMBLA0A0V0H7671e-50A0A0V0H767_SOLCH; Putative mini zinc finger protein-like
STRINGSolyc02g087970.1.12e-48(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11052486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.11e-26mini zinc finger