PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02016g03008.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 146aa    MW: 16274.3 Da    PI: 8.4143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02016g03008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.8e-171666155
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++y+G+r++k +g+Wv+eIr+p   g r r +lg++ t+e Aa a++ a  +l+ 
  Peinf101Scf02016g03008.1 16 KKYRGIRRRK-WGKWVSEIRVP---GSRDRLWLGTYTTPEAAAVAHDIAYYCLRE 66
                              59*****998.**********8...435***********************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.75E-251676No hitNo description
PROSITE profilePS5103221.5491776IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-261776IPR001471AP2/ERF domain
SMARTSM003803.2E-261782IPR001471AP2/ERF domain
PfamPF008475.1E-91765IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-171777IPR016177DNA-binding domain
PRINTSPR003673.0E-91829IPR001471AP2/ERF domain
PRINTSPR003673.0E-94056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MSSSDEGGIN TSAHQKKYRG IRRRKWGKWV SEIRVPGSRD RLWLGTYTTP EAAAVAHDIA  60
YYCLRESSSL DKLNFPLMLP VGIERGMSPR SVQKKASDAG MAIDAQLVTS YPAGRGTQQE  120
MSDHAYQSVD NVQNEALSIS VEDYLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-15582278Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767328.14e-85PREDICTED: ethylene-responsive transcription factor ERF020-like
RefseqXP_016443781.14e-85PREDICTED: ethylene-responsive transcription factor ERF020-like
SwissprotO805422e-45ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A1S3XV099e-84A0A1S3XV09_TOBAC; ethylene-responsive transcription factor ERF020-like
TrEMBLA0A1U7VLT99e-84A0A1U7VLT9_NICSY; ethylene-responsive transcription factor ERF020-like
STRINGXP_009767328.11e-84(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.16e-48ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]