PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01932g02006.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bZIP
Protein Properties Length: 363aa    MW: 41211.8 Da    PI: 7.5418
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01932g02006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.4e-1179110334
                               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                               ++k++rr+++NReAAr+sR RKka++++Le+ 
  Peinf101Scf01932g02006.1  79 SDKVQRRLAQNREAARKSRMRKKAYVQQLETS 110
                               79***************************984 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-677137IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-977122No hitNo description
PROSITE profilePS502179.03679123IPR004827Basic-leucine zipper domain
PfamPF001707.2E-879114IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-781116No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
PfamPF141448.6E-29167240IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MNMTSPTTQF APTRRMGIYE PFHQMSVWED AFRGDIMPSS DACMVSPTND RPDDKSGYTS  60
GEQHMPSGSG DNQAPRSSSD KVQRRLAQNR EAARKSRMRK KAYVQQLETS RLKLAQLEVE  120
LERARQQGLY VLGSNNSMGL FGTINPGIAA FEMEYSHWVE EQQKKNTELR NVLQSPVSDM  180
ELQLLVENVL SHYYNLFRMK ADAAKADVFY LMSGMWRTSV ERFFLWLGGF KPSDLINVVM  240
PQLEPLSDQQ IIRVCNLRHC CQQAEDALTQ GMDKLQQTLA QSILNMSTGA GSYSSQMVSS  300
MENLEALESF VNQADHLRQQ TLQQMSLILT TRQAARGLLA FGEYLQRLRA LSSLWAARPR  360
EPT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0142160.0BT014216.1 Lycopersicon esculentum clone 133394F, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019256722.10.0PREDICTED: transcription factor TGA1-like
SwissprotQ392371e-158TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A1J6HTG20.0A0A1J6HTG2_NICAT; Transcription factor tga1
STRINGXP_009776929.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-161bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]