PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01414g00006.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 181aa    MW: 20758.4 Da    PI: 8.3963
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01414g00006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-184088355
                       AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              y+GVr+++ +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+ +l+g
  Peinf101Scf01414g00006.1 40 YRGVRRRR-WGKWVSEIREPRK---KSRIWLGSFSSPEMAARAYDVAAYCLKG 88
                              9****777.**********843...6************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.33E-333897No hitNo description
PROSITE profilePS5103223.6043996IPR001471AP2/ERF domain
SMARTSM003801.1E-3639102IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-223998IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-313997IPR001471AP2/ERF domain
PRINTSPR003672.3E-124051IPR001471AP2/ERF domain
PfamPF008472.3E-124088IPR001471AP2/ERF domain
PRINTSPR003672.3E-127898IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MEQRQPLPPC NENNISTSPV NTDCQKIDIH KGSNTRHQNY RGVRRRRWGK WVSEIREPRK  60
KSRIWLGSFS SPEMAARAYD VAAYCLKGCK AQLNFPDEIE HLPRPKTCMA RDIQAAAAIA  120
ANNANIVRKK NNEDCVCDDF WTEIELPELR DAGKECLSSE SSLNRSDYLF SHELQAYSSR  180
V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-203198674Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019228064.18e-68PREDICTED: ethylene-responsive transcription factor ERF023-like
SwissprotQ1ECI21e-50ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A314KP902e-66A0A314KP90_NICAT; Ethylene-responsive transcription factor erf023
STRINGXP_009790153.14e-65(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138741314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.17e-40ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]