PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01267g03009.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TCP
Protein Properties Length: 297aa    MW: 33613.5 Da    PI: 7.5018
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01267g03009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.31.9e-3621147289
                       TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................... 65 
                               +gkkdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++                     
  Peinf101Scf01267g03009.1  21 TGKKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLDELppwnpvndinnmptsiaeada 105
                               79**************************************************************999999888877766665544 PP

                       TCP  66 ..........ssssaseceaesssssas...nsssg................k 89 
                                         +        +++++ + +   +   +                +
  Peinf101Scf01267g03009.1 106 agssgnnivlE--------QQQQEFQLQrqlE---EnnqsggnsspymmqmpN 147
                               42222222221........2222222111110...112222233334444440 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.5E-3321133IPR005333Transcription factor, TCP
PROSITE profilePS5136933.252381IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MKRATGGEIV QVEGGHIIRS TGKKDRHSKV CTAKGPRDRR VRLSAHTAIQ FYDVQDRLGY  60
DRPSKAVDWL IKKAKNAIDK LDELPPWNPV NDINNMPTSI AEADAAGSSG NNIVLEQQQQ  120
EFQLQRQLEE NNQSGGNSSP YMMQMPNGET QSLGDTMKSF FPMNSGTSLM NFQNYPHEIM  180
PRASIHNEDL GLSLHTTFHD HNNSNHRGNS HNDQAALFSS QNFEANYPRM ASWILPHQQT  240
LFSQSATFPQ REPLQSNFSH LIHHAWEAER SIWYVVIIEG QVCSTGSNRN MLRVSKM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009629629.11e-131PREDICTED: transcription factor TCP4-like
SwissprotA2WM143e-53PCF5_ORYSI; Transcription factor PCF5
SwissprotQ8LPR53e-54TCP4_ARATH; Transcription factor TCP4
SwissprotQ8LT073e-54PCF5_ORYSJ; Transcription factor PCF5
TrEMBLM1AJX31e-130M1AJX3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000243281e-130(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.39e-55TCP family protein