PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01203g01012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 827aa    MW: 91000 Da    PI: 6.2595
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01203g01012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.46e-191876357
                              --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                  Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                              k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Peinf101Scf01203g01012.1 18 KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                              5678*****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.6771377IPR001356Homeobox domain
SMARTSM003896.8E-161581IPR001356Homeobox domain
SuperFamilySSF466898.98E-171779IPR009057Homeodomain-like
CDDcd000861.22E-161878No hitNo description
PfamPF000461.6E-161976IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.609.9E-192076IPR009057Homeodomain-like
CDDcd146868.21E-670109No hitNo description
PROSITE profilePS5084826.172153381IPR002913START domain
CDDcd088753.02E-79157372No hitNo description
SMARTSM002347.5E-40162372IPR002913START domain
PfamPF018521.3E-53163371IPR002913START domain
SuperFamilySSF559611.28E-37163373No hitNo description
Gene3DG3DSA:3.30.530.201.2E-22163368IPR023393START-like domain
PfamPF086703.4E-50684826IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 827 aa     Download sequence    Send to blast
MAVTSTYKDS KLAMDSGKYV RYTPEQVEAL ERLYHECPKP SSLRRQQLIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKES SRLQGVNRKL TAMNKLLMEE NDRLQKQVSQ LVYENSFFRQ  120
QTQNAALATT DNNSCESVVT SGQHNLTPQR PPRDASPAGL LSLAEETLTE FLSKATGTAV  180
EWVQMPGMKP GPDSIGIIAI SHGCSGVASR ACGLVGLDPT RVSEILKDRP SWFRDCRTVD  240
VLNVMSTGNG GTIELLYMQL YAPTTLAPGR DFWLMRYTSV MEDGSLVVCE RSLNNTQNGP  300
SMPPVQNFVR AEMLPSGYLI RPCEGGGSII HIVDHIDLEP WSVPEVLRPL YESSTVLSQR  360
TTMAALRHLR QISQEISQPT VSGWGRRPAA LRALSQRLSK GFNEAVNGFT DEGWSLLESD  420
GIDDVTILVN SAPSKLMGAN LSYANGFPSM SSAVLCAKAS MLLQNVPPAI LLRFLREHRS  480
EWADSGIDAY SAAAVKAGPC SIPVTRTGSF GGQFMEVIRL ESIGHYQEDM IMPGDIFLLQ  540
LCSGVDENAV GTCSELIFAP IDASFADDAP LLPSGFRIIP LDSKSDSSSP NRTLDLASTL  600
EVGPAGNRLS GDYSKKSGST KSVMTIAFQF AFEIHLQENI AAMARQYVRS IISSVQRVAL  660
ALSPSHLGSV PGLRSPPGTP EAQTLARWIC QSYRFFLGTE LLKSVSGGSE SILKELWNHS  720
DALMCCSLKA LPLFTFANEA GLDMLETTLV ALQDITLEKI FDDNGRKTLF SELPQITQQG  780
FACLQGGICL SSMGRPISYE RAVAWKVLND EENPHCICFM FINWSFV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016537761.10.0PREDICTED: homeobox-leucine zipper protein ATHB-15 isoform X2
SwissprotQ9ZU110.0ATB15_ARATH; Homeobox-leucine zipper protein ATHB-15
TrEMBLM1CUD50.0M1CUD5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000749340.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45724140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein