PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01142g04002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 265aa    MW: 29472.5 Da    PI: 10.1106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01142g04002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-18124173255
                       AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa++ l+g
  Peinf101Scf01142g04002.1 124 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARWLRG 173
                               59*******.**********32....25**********************97776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.36E-18123182No hitNo description
Gene3DG3DSA:3.30.730.107.1E-29124181IPR001471AP2/ERF domain
PfamPF008476.8E-13124173IPR001471AP2/ERF domain
PROSITE profilePS5103222.273124181IPR001471AP2/ERF domain
SMARTSM003802.2E-31124187IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-21124182IPR016177DNA-binding domain
PRINTSPR003671.0E-10125136IPR001471AP2/ERF domain
PRINTSPR003671.0E-10147163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MYNAHIQMLQ KVHDPLFFPT QESLNQHEQI DHLMHQLPHN FCIDSFPEIP TQENEKSPAL  60
EGIGAVVGEH VLFGGCDKNK NTNDQNFETG TSVSIIKRTG GTDKVRSLGE EKRNIGNVIP  120
VQKNYRGVRK RPWGRWSAEI RDRIGRCRHW LGTFDTAEEA ARAYDAAARW LRGSKARTNF  180
QIPPIVPLPL TISSTSTSSS SSSSAEVKKN KKVSTRGKGN MPINRKCSVV TSAAHLFSSD  240
CVVNEVKKGV VAHVELDLKL GFGKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-17123182161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611846.13e-95PREDICTED: ethylene-responsive transcription factor ERF084-like
RefseqXP_016449845.13e-95PREDICTED: ethylene-responsive transcription factor ERF084-like
SwissprotQ9M8M51e-27ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLR4WAR87e-94R4WAR8_TOBAC; Ethylene response factor #231
STRINGXP_009611846.11e-94(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.11e-28ERF family protein