PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01057g01003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 689aa    MW: 75291.8 Da    PI: 5.6197
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01057g01003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.82.4e-0525501843
                              HHHHSSS--HHHHHHHHHHCTS-HHH CS
                  Homeobox 18 lFeknrypsaeereeLAkklgLterq 43
                              +F++n++p+++ +eeLAkklg+ ++q
  Peinf101Scf01057g01003.1 25 AFKENPHPDKKIIEELAKKLGMGTKQ 50
                              7*********************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.8E-42449IPR009057Homeodomain-like
CDDcd000861.24E-42450No hitNo description
PROSITE profilePS5084818.061193400IPR002913START domain
SuperFamilySSF559611.21E-18194396No hitNo description
CDDcd088753.03E-75197396No hitNo description
SMARTSM002341.4E-12202397IPR002913START domain
PfamPF018523.1E-6203299IPR002913START domain
PfamPF018522.1E-18333394IPR002913START domain
SuperFamilySSF559612.33E-6463683No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    Send to blast
MSEKGESSND VVSGRLSEDE NESSAFKENP HPDKKIIEEL AKKLGMGTKQ SQSEKHEHEL  60
LKQQNDQLRL EKITLEEAMK NPVCNRCGSQ ASLTDVNIDE HQAKIEHEHL KNEVKSITLL  120
AKKLLVPLAS LEGSTHLVME NSGSVFVGGK NGFGDINSVE TQLPTGIDLN NDPPSPLPVT  180
PPQPTASLAN VDVSYDKSKL MDLAVAAMNE LLRLAEIGEP LWVRSLDGGG EILSLEEYVC  240
SFTPCTGMKP RHFTTEATKA SAIVIINSLT LVETLMDGSR WVEMFSCNVG KTSAADVISS  300
CSIGSWSGTL KLVFSFSYYF AGIHTSCSQP GDIGNCRRLP SGCIIQDMPN GYSKITWIEH  360
MEYNESVVHH LYRPLVRNGL GFGAQRWMAT LQRMSEFKAV MMSPVNATGD HAGSIIVPFF  420
LTLSDLYMCM IISGSDEVPY VAVVCSSGRR SIAVLAQRMA RSFCGGVCAT LHKWDPIQEA  480
DGEDARLMIR RNIGDPGELT GVILSATKTI WLPVKQHRLI EFLLNKEKRS QWDVSYSDPL  540
KHMVDIAKGQ NLENSISLFR ADEDDTNADR NSKLILQDTS SDATGFLLVY ATIDTSAMNV  600
VMDGGDSSSV AFLPSGISIV PDYFQDFSSA SNSTGTSHGF SCTGSLVTIG FQILVNSLPT  660
AKLKIQSVKK VNDLIARTIK GIRAAFKCE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016449095.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1531837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.11e-163homeodomain GLABROUS 1