PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00962g16030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 314aa    MW: 35577.8 Da    PI: 4.8356
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00962g16030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.23.3e-28133191259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s + p  +++tY+ eHnh+
  Peinf101Scf00962g16030.1 133 SDKWAWRKYGQKPIKGSPNPRSYYRCSSSkGCLARKQVEQSCNKPGNFIVTYTAEHNHS 191
                               79*************************998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-30118193IPR003657WRKY domain
SuperFamilySSF1182902.35E-25126193IPR003657WRKY domain
PROSITE profilePS5081131.755127193IPR003657WRKY domain
SMARTSM007744.4E-33132192IPR003657WRKY domain
PfamPF031065.2E-24134190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MAQCSDWCLQ AVVKGSSNID SKSCNFSLLD FQESEYLTFS EMKMEVVGDE LEELYKPFYP  60
VDGQNIVMAS SISCPKEPKE EKIEEIFQEQ QGRINESFSL NMAGAVYVPK YKKRKNEQKR  120
VVLQLTADEY LSSDKWAWRK YGQKPIKGSP NPRSYYRCSS SKGCLARKQV EQSCNKPGNF  180
IVTYTAEHNH SQPTRRNSLA GTIKTKFPTS KSPNNSGSPK MLQPKISSPQ YGSPTTLLNV  240
ESNVHKDEFP EIEINQENII IGDYNEEIRM FEGSDENDYV SVQDMFDGDF FAGLEDIDGF  300
NSSFGCNISM SPFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-16123193877Probable WRKY transcription factor 4
2lex_A3e-16123193877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764282.11e-138PREDICTED: probable WRKY transcription factor 29
RefseqXP_016483102.11e-138PREDICTED: probable WRKY transcription factor 29
SwissprotQ9SUS13e-48WRK29_ARATH; Probable WRKY transcription factor 29
TrEMBLM1AWU61e-115M1AWU6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000320911e-114(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.15e-45WRKY family protein