PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00857g06001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 192aa    MW: 20464.9 Da    PI: 4.3716
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00857g06001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.7e-182372355
                       AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                              y+G+r +k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  Peinf101Scf00857g06001.1 23 YRGIRKRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 72
                              9******************9.....4489***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.4E-282282IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-192282IPR016177DNA-binding domain
SMARTSM003802.6E-312286IPR001471AP2/ERF domain
PROSITE profilePS5103222.512280IPR001471AP2/ERF domain
PRINTSPR003678.4E-82334IPR001471AP2/ERF domain
CDDcd000188.78E-292382No hitNo description
PfamPF008476.7E-112372IPR001471AP2/ERF domain
PRINTSPR003678.4E-86282IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MSAFGTSGGA SNSNGISGRH PMYRGIRKRK SSGKWVSEIR EPRSPNRIWL GTFPTPEMAA  60
VAYDVAALAL KGADAELNFP NSASSLPVPA TNSPRDIQAA AACAAAAIGA AGDALAIREV  120
GDNTLPVSRE AENLMTQGNV NEFMDEDLIF DMPNVIMNMA EGMLLSPPRF NYPDDDVTSA  180
ENTADQSLWN YP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-131182374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009590884.15e-88PREDICTED: ethylene-responsive transcription factor ERF024
RefseqXP_016496384.15e-88PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR06e-59ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A1S4C6451e-86A0A1S4C645_TOBAC; ethylene-responsive transcription factor ERF024-like
STRINGXP_009590884.12e-87(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-47ERF family protein