PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00782g11004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 509aa    MW: 57388.1 Da    PI: 4.1362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00782g11004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.8e-2072130256
                       AP2   2 gykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkklege 56 
                                y+GVr++  +g+WvAeIr+ +++ +    + kr +lg+f ta eAa a+++a+k+++g+
  Peinf101Scf00782g11004.1  72 IYRGVRQRT-WGKWVAEIREpVYISNeyrSNgKRLWLGTFSTAVEAALAYDEAAKAMYGH 130
                               69****999.**********666655595449*************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.04E-3071138No hitNo description
PfamPF008475.7E-1471130IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-2072138IPR016177DNA-binding domain
SMARTSM003806.2E-3372143IPR001471AP2/ERF domain
PROSITE profilePS5103222.37972137IPR001471AP2/ERF domain
PRINTSPR003671.6E-97384IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-2873138IPR001471AP2/ERF domain
PRINTSPR003671.6E-9103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MMDSCENRKL KRRRNGSASI EETLSMWKNN MIEFNATLDD GMKKRRRKFP PNKGSKKGCM  60
RGKGGPENLE CIYRGVRQRT WGKWVAEIRE PVYISNEYRS NGKRLWLGTF STAVEAALAY  120
DEAAKAMYGH DAILNFPDYY VQNVAELAND SPNASITRTT SMESSESSIE DVKIEIEHAL  180
EASNTPEDSV VAIADEKTVV DETNLCYVGR AEESETCTQH ECPVVKHDSS ACCLNRESEE  240
IAAEDSVNYV KGDKCSSRID SEPTSSSVKV DTSSENNFVQ DRSLETLCDS NQLHHEITDL  300
KTNDSTFDKD VLTSNEDYDS GDKILFPCDS ITLQDCDGSM NTLQEQPLDF RSSENMNADI  360
GSLQFMEYLL MEDNSTMEAM NIPDTFCLNE NIDERYSLQS FLESFDVEGV LDPQVSIEAN  420
TLNNELSCDC YTYDQQSNLL NPQANAAVHS DGVMSKEDES KEQYINIFGH EDRGTGEEKP  480
WDPSNSLVSM EDLYILNPDF DIKSFLDDF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1973137360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-1973137663ATERF1
3gcc_A4e-1973137663ATERF1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1613NRKLKRRR
24247KKRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019248910.10.0PREDICTED: dehydration-responsive element-binding protein 2B-like
TrEMBLA0A1J6I9X90.0A0A1J6I9X9_NICAT; Dehydration-responsive element-binding protein 2a
STRINGXP_009768300.11e-179(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA79651530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.13e-33ERF family protein