PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00613g07001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Dof
Protein Properties Length: 269aa    MW: 30163.7 Da    PI: 7.1219
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00613g07001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof107.28.6e-343996360
                    zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                               + l+cprC s ntkfCyynny+ sqPr++Ck+C+r+Wt+GG+lrn+PvGggr+++++
  Peinf101Scf00613g07001.1 39 PEPLSCPRCGSINTKFCYYNNYNKSQPRHYCKGCKRHWTAGGTLRNIPVGGGRKNKRT 96
                              67899**********************************************9776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-203595IPR003851Zinc finger, Dof-type
PfamPF027017.4E-304195IPR003851Zinc finger, Dof-type
PROSITE profilePS5088426.7764296IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104480IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MGLSTKLVSI DDHGLDSCQN SLQELPKPPP IRNQPTSKPE PLSCPRCGSI NTKFCYYNNY  60
NKSQPRHYCK GCKRHWTAGG TLRNIPVGGG RKNKRTRPTA HSVDHITGRK YVTLEVNDRR  120
CPLITTTITT PTTSNVSSYT IRGNSIIDEG KKEYDIFYET LNIASSSLPL DHTYFSFSSI  180
GHAPCSVPDY VQSSNAYEYM GKFDSTMEES TITTVMPITS SSSLSQSWQV QESSNLVENM  240
PSTYWNWNEI DTLSAADLNI PWDDLEIKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624330.11e-118PREDICTED: uncharacterized protein LOC104115407
TrEMBLK4B9861e-100K4B986_SOLLC; Uncharacterized protein
TrEMBLM1C1N11e-100M1C1N1_SOLTU; Uncharacterized protein
STRINGSolyc02g078620.1.11e-99(Solanum lycopersicum)
STRINGPGSC0003DMT4000577821e-99(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61712033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66940.13e-27Dof family protein