PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00577g02007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 130aa    MW: 14473 Da    PI: 7.9411
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00577g02007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.12.5e-143275249
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
                              +y+GVr ++ +g+++AeIrdp +   +++++lg+ + ++eAaka++ a
  Peinf101Scf00577g02007.1 32 HYSGVRKRP-WGKFAAEIRDPGD---KTHVWLGTIDMPDEAAKAYDTA 75
                              69*******.**********944...5*******************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.823292IPR001471AP2/ERF domain
CDDcd000186.82E-173280No hitNo description
SuperFamilySSF541717.85E-143283IPR016177DNA-binding domain
PfamPF008477.8E-93275IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-213282IPR001471AP2/ERF domain
SMARTSM003804.3E-173294IPR001471AP2/ERF domain
PRINTSPR003671.9E-73344IPR001471AP2/ERF domain
PRINTSPR003671.9E-75571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MPHGTAEGKR QVDGGMVVVT AAKRGRSSDE VHYSGVRKRP WGKFAAEIRD PGDKTHVWLG  60
TIDMPDEAAK AYDTATRLFR RGDQTADDAD FEHEQLSPDE RGSKYFRIWF LAGVVKGFHG  120
SNSQNHRGAD
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009769627.11e-23PREDICTED: ethylene-responsive transcription factor 8-like
RefseqXP_016510115.11e-23PREDICTED: ethylene-responsive transcription factor 8-like
SwissprotQ9FE674e-21ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLA0A1S4D9J63e-22A0A1S4D9J6_TOBAC; ethylene-responsive transcription factor 8-like
TrEMBLA0A1U7VP003e-22A0A1U7VP00_NICSY; ethylene-responsive transcription factor 8-like
TrEMBLR4WAQ73e-22R4WAQ7_TOBAC; Ethylene response factor #230
STRINGXP_009769627.15e-23(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-23erf domain protein 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]
  3. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]