PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00571g28002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 165aa    MW: 18661.4 Da    PI: 9.8252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00571g28002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-202171155
                       AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g
  Peinf101Scf00571g28002.1 21 CHFRGVRKRP-WGRYAAEIRDpWK----KTRRWLGTFDTAEEAALAYDEAARSLRG 71
                              689*******.**********883....5999**********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.1E-132171IPR001471AP2/ERF domain
CDDcd000183.33E-312179No hitNo description
SuperFamilySSF541714.58E-222280IPR016177DNA-binding domain
PROSITE profilePS5103222.0762279IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-312279IPR001471AP2/ERF domain
SMARTSM003806.7E-352285IPR001471AP2/ERF domain
PRINTSPR003675.1E-102334IPR001471AP2/ERF domain
PRINTSPR003675.1E-104561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MVVHNSTMCG GSQTVRTFQE CHFRGVRKRP WGRYAAEIRD PWKKTRRWLG TFDTAEEAAL  60
AYDEAARSLR GPKAKTNFEL DPIATGPIAP PFSLMKPAFG SEKLPQWCFQ ALYGSGQENK  120
ITVASSEYTE YKIEGVGVVM NKHEKKTKSE KKPFLFDLNL PAPLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-202280564ATERF1
3gcc_A4e-202280564ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00194DAPTransfer from AT1G50640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6690781e-47AB669078.1 Nicotiana tabacum NtERF#074 gene for ethylene response factor #74, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009788813.15e-67PREDICTED: ethylene-responsive transcription factor 9-like
RefseqXP_016472543.15e-67PREDICTED: ethylene-responsive transcription factor 9-like
TrEMBLA0A1U7XD611e-65A0A1U7XD61_NICSY; ethylene-responsive transcription factor 9-like
TrEMBLR4WAR61e-65R4WAR6_TOBAC; Ethylene response factor #74
STRINGXP_009788813.12e-66(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.15e-24ERF domain protein 12