PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00527g04002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 189aa    MW: 21304.6 Da    PI: 4.5937
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00527g04002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-194089255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               y+GVr++  +g+WvAeIr+p   + r +r++lg+f t  eAa+a++ a+++l+g
  Peinf101Scf00527g04002.1 40 TYRGVRQRT-WGKWVAEIREP---N-RgARIWLGTFNTSIEAARAYDDAARRLYG 89
                              69****999.**********8...3.35*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.27E-193999No hitNo description
PfamPF008476.3E-144089IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-214097IPR016177DNA-binding domain
PROSITE profilePS5103221.8914097IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-304098IPR001471AP2/ERF domain
SMARTSM003805.5E-3540103IPR001471AP2/ERF domain
PRINTSPR003672.2E-104152IPR001471AP2/ERF domain
PRINTSPR003672.2E-106379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MAESVETTSV CEKPCKKSTV GRSRKGCMRG KGGPENALCT YRGVRQRTWG KWVAEIREPN  60
RGARIWLGTF NTSIEAARAY DDAARRLYGP DAKLNLSESS EQLVNSEENF NCMENNIESG  120
ESCSVLDEAS IFKDGNGKYL VWETPAPSLL DEQEHNLMSG VEFPREFNWA NEGEMNIDFE  180
GNDNFLFHM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-154196662ATERF1
3gcc_A1e-154196662ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00519DAPTransfer from AT5G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574802.12e-78PREDICTED: dehydration-responsive element-binding protein 2C-like
TrEMBLA0A1U8GU744e-77A0A1U8GU74_CAPAN; Dehydration-responsive element-binding protein 2D
TrEMBLA0A2G2Y7M74e-77A0A2G2Y7M7_CAPAN; dehydration-responsive element-binding protein 2C-like
TrEMBLA0A2G3B2F05e-77A0A2G3B2F0_CAPCH; Dehydration-responsive element-binding protein 2D
STRINGXP_009630729.16e-68(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31552247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.12e-39ERF family protein