PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00491g05013.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 238aa    MW: 25447.2 Da    PI: 5.8128
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00491g05013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-172777155
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++ykGVr ++ +g++v+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Peinf101Scf00491g05013.1 27 KKYKGVRMRS-WGSYVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 77
                              59*****998.**********9...336*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.14E-172787No hitNo description
PfamPF008472.5E-102877IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-272887IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-172887IPR016177DNA-binding domain
SMARTSM003801.6E-302891IPR001471AP2/ERF domain
PROSITE profilePS5103220.7452887IPR001471AP2/ERF domain
PRINTSPR003677.0E-82940IPR001471AP2/ERF domain
PRINTSPR003677.0E-85167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MVKTEQKTLP ESSKTMALSS SSNNMKKKYK GVRMRSWGSY VSEIRAPNQK TRIWLGSYST  60
PEAAARAYDA ALLCLKGPSA SSNLNFPCNS SFYHHLTHPS DHTLSPKAIQ RVAAAAAAVV  120
EGGGNGSLVA AAAAAVVEGG GNGSSASHDN PISPSPPLSS TSTSSSPLSH GDQDDLSILD  180
YTFDHCVEET GVSMIGQWYN FDSPKYNDML HGTIFFDPPS MEDVYEEGAA DIPLWSFF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ2284575e-44FJ228457.1 Glycine max AP2 domain-containing transcription factor 5 (AP2-5) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009592101.14e-72PREDICTED: ethylene-responsive transcription factor ERF014-like
RefseqXP_016460968.15e-72PREDICTED: ethylene-responsive transcription factor ERF014-like
TrEMBLA0A2G3CLK54e-79A0A2G3CLK5_CAPCH; Ethylene-responsive transcription factor
STRINGXP_009592101.12e-71(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-28ERF family protein