PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00475g04016.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TCP
Protein Properties Length: 350aa    MW: 39627.6 Da    PI: 10.2544
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00475g04016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP125.17.6e-39902423133
                       TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..........seceaes 77 
                               +k+ r+ ki T++g+RdRRvRls+ +a++fFdLq++LGfdk+skt++WL++++k ai elt+ s+++a          s+c    
  Peinf101Scf00475g04016.1  90 KKRERSCKILTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLFTNSKLAIEELTNWSTDQAhhpdiagatkSSC---- 170
                               7999***********************************************************777773333333322222.... PP

                       TCP  78 ssssasnsssg.....................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                                 ++++ +  +                     k +++++k++ ++++a+s+  + +esr  arararert +km  +
  Peinf101Scf00475g04016.1 171 --NETA-K--NgasptsecenlaiatneglerKPKRAKEKNEVKNHEATSHVLIGRESRDMARARARERTIKKMWSR 242
                               ..1111.1..1123455566777888888885445555588888888888888888*****************9766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.3E-3590240IPR005333Transcription factor, TCP
PROSITE profilePS5136929.92891149IPR017887Transcription factor TCP subgroup
PROSITE profilePS513709.693221238IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MFPASNSTGN PLPHPSSTFH SSSPFLGLNG NQILLHHYQD QFSTHYKNAL LRDSTANINN  60
MSLSTNSIIN RPNKSYCDSL RSFPSKKKSK KRERSCKILT SQGPRDRRVR LSIGIARKFF  120
DLQEMLGFDK PSKTLDWLFT NSKLAIEELT NWSTDQAHHP DIAGATKSSC NETAKNGASP  180
TSECENLAIA TNEGLERKPK RAKEKNEVKN HEATSHVLIG RESRDMARAR ARERTIKKMW  240
SRIETSERSA NYSQIKSNFF GKKDIREMEE QFCKNKLQAS EGPNKEIFQG SGVTKIKIKP  300
SLILGFHPNN LYAPIDSAAY YGSSSFNIEN WDTRLQGPWK PWDSVQSNII
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803760.11e-170PREDICTED: transcription factor CYCLOIDEA-like
RefseqXP_016462466.11e-170PREDICTED: transcription factor CYCLOIDEA-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43332244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.24e-22TCP family protein