PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00459g04014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 211aa    MW: 24175 Da    PI: 7.5517
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00459g04014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.65.5e-124290156
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                              s++kGV     +g W A+I+       +kr++lg+f +++eAa a++ a+ +l+ge
  Peinf101Scf00459g04014.1 42 SRFKGVV-GQHNGHWGAQIYA------NKRIWLGTFKSEKEAAMAYDSAAIRLRGE 90
                              6899996.4448*******99......8**********99**************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.9E-74290IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-154298IPR016177DNA-binding domain
CDDcd000182.26E-244299No hitNo description
SMARTSM003807.4E-2043103IPR001471AP2/ERF domain
PROSITE profilePS5103216.7394397IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-184397IPR001471AP2/ERF domain
Gene3DG3DSA:2.40.330.103.7E-11154187IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.54E-8157187IPR015300DNA-binding pseudobarrel domain
CDDcd100171.08E-8158191No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MEEVISSTTT YVSENSYESS SNNQLHNKKR PRDEGKACNS SSRFKGVVGQ HNGHWGAQIY  60
ANKRIWLGTF KSEKEAAMAY DSAAIRLRGE DSHRNFPWTN LTLLEPSFQG QFSTEDILRM  120
IKDGSYPSKF DEFLKEKYEE NHPLNTIQGN EVFSCKQLFT KELTPSDVGK LNRLVIPKKF  180
ALKYFPQVIG KGDDCENQEF EDSELRSKKN A
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771974.12e-91PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120
RefseqXP_016492322.12e-91PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120-like
RefseqXP_019257867.13e-91PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120
SwissprotQ9C6883e-59RAVL3_ARATH; AP2/ERF and B3 domain-containing transcription factor At1g51120
TrEMBLA0A1S4BTX15e-90A0A1S4BTX1_TOBAC; AP2/ERF and B3 domain-containing transcription factor At1g51120-like
TrEMBLA0A1U7WBE05e-90A0A1U7WBE0_NICSY; AP2/ERF and B3 domain-containing transcription factor At1g51120
STRINGXP_009771974.19e-91(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52522339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.13e-61RAV family protein