PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00395g02051.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 310aa    MW: 34926.2 Da    PI: 6.7321
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00395g02051.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.6e-12164211355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h ++Er+RR+++ ++f  L  l+P +     kK++Ka++L  A++++k+Lq
  Peinf101Scf00395g02051.1 164 QDHIIAERKRREKLSQRFIALSALIPGL-----KKMDKASVLGDAIKHLKQLQ 211
                               6799************************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.447161210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.3E-10164211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-16165222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.45E-12166215No hitNo description
SuperFamilySSF474591.83E-16166227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-14167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MEYHGFNQQW PISSFDELSA ISIAASFGEN NYLHESSPFI SQPIVGLKRP AADQLSQIVE  60
QRPLKNHKTS PSWNNYENNH ILSSSQSAAS PNYHLINSNN YTNQVMNLKP KEESTTMSSS  120
SITFAADQMV SQDSFANQNY MFKANLQGAN KSVISTNGKL TQAQDHIIAE RKRREKLSQR  180
FIALSALIPG LKKMDKASVL GDAIKHLKQL QEKVKTLEEQ TRKKPVESVV FVKKYELYGD  240
AENSSSDENF SSGTLQVDEP LPEIEARISE RNVLVRIHCE KRKGIVDKTV AEIEKLNLSM  300
DEEFAMTVQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A3e-13165242883Transcription factor MYC2
5gnj_B3e-13165242883Transcription factor MYC2
5gnj_E3e-13165242883Transcription factor MYC2
5gnj_F3e-13165242883Transcription factor MYC2
5gnj_G3e-13165242883Transcription factor MYC2
5gnj_I3e-13165242883Transcription factor MYC2
5gnj_M3e-13165242883Transcription factor MYC2
5gnj_N3e-13165242883Transcription factor MYC2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169174ERKRRE
2170175RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019232955.11e-169PREDICTED: transcription factor bHLH25-like
TrEMBLA0A1J6KYH21e-168A0A1J6KYH2_NICAT; Transcription factor bhlh25
STRINGXP_009779237.11e-168(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17602461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-48bHLH family protein