PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00373g04007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 233aa    MW: 26547.9 Da    PI: 7.7243
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00373g04007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.72e-3178453129
                       NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                                +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++  +g ++g++ktLvfyk+rap+g kt W+mhe+rle
  Peinf101Scf00373g04007.1   7 LNSNEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPrTGVVIGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 84 
                               4678*************************************9867888***************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100540.681102IPR003441NAC domain
SuperFamilySSF1019411.07E-394102IPR003441NAC domain
PfamPF023652.2E-151183IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MVKVAKLNSN EWYFFSFRDR KYATGFRTNR ATTSGYWKAT GKDRTVVDPR TGVVIGMRKT  60
LVFYKNRAPN GIKTGWIMHE FRLENPHIPP KEDWVLCRVF HKGKDGNNVG NNLSPENMYE  120
TSVTSAELVV SPLNMENHAT LPKLLPYADG YRPTAAAFFH SPTHHSQNSS NFQLSQEINK  180
VLANEMAQSK YGKEDEFGFL YDMNFEDTGL QDGGVHSCLG DMKFEDENSL VFI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-27510266165NO APICAL MERISTEM PROTEIN
1ut4_B2e-27510266165NO APICAL MERISTEM PROTEIN
1ut7_A2e-27510266165NO APICAL MERISTEM PROTEIN
1ut7_B2e-27510266165NO APICAL MERISTEM PROTEIN
3swm_A2e-27510269168NAC domain-containing protein 19
3swm_B2e-27510269168NAC domain-containing protein 19
3swm_C2e-27510269168NAC domain-containing protein 19
3swm_D2e-27510269168NAC domain-containing protein 19
3swp_A2e-27510269168NAC domain-containing protein 19
3swp_B2e-27510269168NAC domain-containing protein 19
3swp_C2e-27510269168NAC domain-containing protein 19
3swp_D2e-27510269168NAC domain-containing protein 19
4dul_A2e-27510266165NAC domain-containing protein 19
4dul_B2e-27510266165NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624737.11e-135PREDICTED: NAC domain-containing protein 21/22-like
TrEMBLA0A1S4BKT81e-132A0A1S4BKT8_TOBAC; NAC domain-containing protein 21/22-like
STRINGXP_009624737.11e-135(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18822466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-63NAC domain containing protein 74