PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00359g05001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bZIP
Protein Properties Length: 180aa    MW: 21066.4 Da    PI: 5.932
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00359g05001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-1481138562
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                               +++rr+++NRe+ArrsR RK+  ++eL   v  L +eN++L ++l++ ++  ++  +e
  Peinf101Scf00359g05001.1  81 RKQRRMISNRESARRSRMRKQRHLDELWAQVVWLRNENHQLLEKLNHASESHDQTLQE 138
                               689*****************************************99999888777766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-1477141IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.38179142IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-1381130No hitNo description
PfamPF001702.2E-1281139IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-1181153No hitNo description
CDDcd147024.83E-1882133No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MQSTDVTDYY YLLPSNPTQF PSQSCANYNS STFQINRLLN PLYQLQITPQ VQELNPQLTC  60
FNSNSTSDEA DEQQMSLINE RKQRRMISNR ESARRSRMRK QRHLDELWAQ VVWLRNENHQ  120
LLEKLNHASE SHDQTLQENA QLKKEASELR QMITDMHLTS PCPSLRALDD EHCSGLSQNE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193100RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754410.0HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019265101.11e-114PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC27e-41BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A314L2U21e-113A0A314L2U2_NICAT; Basic leucine zipper 43
STRINGXP_009603686.11e-113(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-50basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]