PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00273g02004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GRAS
Protein Properties Length: 284aa    MW: 31971.6 Da    PI: 7.761
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00273g02004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS76.16.2e-24217412181
                      GRAS  12 vssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalkl....fsevsPil 91 
                               v+ +++ +a++lL+  ++ +s +g+p+qR++ +++ AL+ r+ r++  + ++  +  e ++++++e l++l           P  
  Peinf101Scf00273g02004.1   2 VARKKFDRARKLLSLCNQSSSATGNPVQRVVYHLADALQDRIDRETRLMPSSGeNDIEVHPDSVEEPLMSLYPavfaCKPEYPRC 86 
                               788999**************************************76666666544455555556666555433432234456899 PP

                      GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakf.Aeelgv 174
                               ++s+++  qaIl+++ +++r+  iDf+i+ G++W+ +lqa+a ++  +   l+i +vg      ++++  +g+r ++f Ae+l++
  Peinf101Scf00273g02004.1  87 QLSQFAGVQAILDSTRTARRINLIDFGIKSGAHWIIFLQAFAGQDgCSLELLKISAVGT----CEKMIDDIGKRSSDFsAETLNI 167
                               ******************************************999445669********....**************97899*** PP

                      GRAS 175 pfefnvl 181
                               pf  + l
  Peinf101Scf00273g02004.1 168 PFTSKQL 174
                               **87764 PP

2GRAS28.51.8e-09184249301365
                      GRAS 301 egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveeesgslvlgWkdr 365
                                g+er  rh +le Wr+ + ++G+ + +ls +   qa+lll+  +  g  ++e + ++l++ Wk+ 
  Peinf101Scf00273g02004.1 184 HGEERGPRHAKLEVWRKLFARFGLAESELSPSSLFQANLLLQWSQYAGlCSIEMDGKCLIFSWKGT 249
                               588999*************************************9966659*************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098517.7761284IPR005202Transcription factor GRAS
PfamPF035142.2E-212174IPR005202Transcription factor GRAS
PfamPF035146.3E-7184249IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MVARKKFDRA RKLLSLCNQS SSATGNPVQR VVYHLADALQ DRIDRETRLM PSSGENDIEV  60
HPDSVEEPLM SLYPAVFACK PEYPRCQLSQ FAGVQAILDS TRTARRINLI DFGIKSGAHW  120
IIFLQAFAGQ DGCSLELLKI SAVGTCEKMI DDIGKRSSDF SAETLNIPFT SKQLKDHSKY  180
NYYHGEERGP RHAKLEVWRK LFARFGLAES ELSPSSLFQA NLLLQWSQYA GLCSIEMDGK  240
CLIFSWKGTL IDYVTLSIVF HLPPRVTCNI AYSSPIEGKS PHDY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009798274.16e-62PREDICTED: DELLA protein RGL1-like
RefseqXP_016450439.16e-62PREDICTED: DELLA protein RGL1-like
RefseqXP_019261537.12e-62PREDICTED: scarecrow-like protein 7
TrEMBLA0A2G2V4E52e-75A0A2G2V4E5_CAPBA; Uncharacterized protein
STRINGXP_009798274.12e-61(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA85001728
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50650.15e-10GRAS family protein