PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00251g12002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 188aa    MW: 20368.7 Da    PI: 5.7032
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00251g12002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-172272255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               y+G+r++k++g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+ +l+g
  Peinf101Scf00251g12002.1 22 IYRGIRRRKSNGKWVSEIREPK----SpNRIWLGSFPTPEMAAVAYDVAAIALKG 72
                              69******************93....578**********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.53E-272182No hitNo description
PfamPF008471.6E-102172IPR001471AP2/ERF domain
PROSITE profilePS5103221.8782280IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-272281IPR001471AP2/ERF domain
SMARTSM003801.6E-312286IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-192281IPR016177DNA-binding domain
PRINTSPR003674.1E-72334IPR001471AP2/ERF domain
PRINTSPR003674.1E-76282IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MATYGGTSTN SATSNYSGRH PIYRGIRRRK SNGKWVSEIR EPKSPNRIWL GSFPTPEMAA  60
VAYDVAAIAL KGPNTELNFP NTAASLPVPT TKSARDIQAA AASAAAAVGA AGDALLAARN  120
REHEKSNLEN FQAIGNEFMD EDLIFDMPNV LANMAEGLLL SPPRFHYADD DTTSAAEYTA  180
YQNLWNYP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627498.14e-91PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR06e-54ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A1J6KVB58e-88A0A1J6KVB5_NICAT; Ethylene-responsive transcription factor erf024
STRINGXP_009627498.11e-90(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.11e-44ERF family protein