PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00208g03001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 129aa    MW: 14671.1 Da    PI: 5.8194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00208g03001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.6e-202374256
                       AP2  2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56
                              +y+GVr+++ +g+++AeIrd       + +r++lg++ taeeAa+a+++a+ +++g+
  Peinf101Scf00208g03001.1 23 KYRGVRRRP-WGKFAAEIRD----SarQGARVWLGTYNTAEEAARAYDRAAYSMRGH 74
                              8********.**********....33334**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.9E-312383IPR001471AP2/ERF domain
PROSITE profilePS5103223.7232381IPR001471AP2/ERF domain
PfamPF008471.2E-152374IPR001471AP2/ERF domain
SMARTSM003804.1E-332387IPR001471AP2/ERF domain
CDDcd000183.06E-182382No hitNo description
SuperFamilySSF541712.09E-232382IPR016177DNA-binding domain
PRINTSPR003671.8E-112435IPR001471AP2/ERF domain
PRINTSPR003671.8E-114763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MEQEPSQGRN MKDNKNSGGG EIKYRGVRRR PWGKFAAEIR DSARQGARVW LGTYNTAEEA  60
ARAYDRAAYS MRGHLAILNF PEEYNLPSSS SHFYSGSSSS SREVLEFECL DDSLLEELLD  120
CDEQPNKRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-382312914129Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2596070.0HQ259607.1 Petunia x hybrida ethylene-responsive-element-binding factor 13 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019264756.12e-58PREDICTED: ethylene-responsive transcription factor 14-like
SwissprotQ9LTC53e-39ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLE3VVS22e-69E3VVS2_PETHY; Ethylene-responsive-element-binding factor 13
STRINGXP_009601836.13e-56(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.12e-25ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]