PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00175g07005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 296aa    MW: 32838 Da    PI: 8.4524
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00175g07005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-203383256
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                              ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Peinf101Scf00175g07005.1 33 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 83
                              799******.7*********43...36**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.2E-293391IPR001471AP2/ERF domain
SMARTSM003808.0E-353396IPR001471AP2/ERF domain
PfamPF008472.5E-153383IPR001471AP2/ERF domain
PROSITE profilePS5103220.5083390IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-203391IPR016177DNA-binding domain
CDDcd000187.78E-333392No hitNo description
PRINTSPR003672.9E-73445IPR001471AP2/ERF domain
PRINTSPR003672.9E-75672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MANSETTIST NTNTTTTTKS PQQQPNKSIL TRKFVGVRQR PSGRWVAEIK DSSQRVRLWL  60
GTYDTPEEAA RAYDEAARAL RGENARTNFA SSITTNPNSD DESINNMLQS NGAISDHSKH  120
GLSFSSIKAK LSKNIQSIMA RNSENKSSSK SRVSDHFTFA RIFHFKNNYQ YQQNHHHVDM  180
KKIEQVVQPS IRVPHVTSDN NNYSNIDPYS SWENSSVSDC SSEWSAFRQL GLDSDNGSLS  240
DASEFFLGDP MMGWVSSPDI MSGGSSSEGS RSKRFKVSSS VMVPPTFTES PLGGEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1433891471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019229180.11e-131PREDICTED: ethylene-responsive transcription factor ERF010-like
TrEMBLA0A2G2W3T71e-132A0A2G2W3T7_CAPBA; Ethylene-responsive transcription factor CRF1
STRINGXP_009598443.11e-128(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17related to AP2 11