PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00145g09001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 199aa    MW: 21807.2 Da    PI: 5.6169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00145g09001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.5e-154695155
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                              s y+G+r  k++g+W++eIr+p+    + +r++lg++ t+e+Aa+a++ a ++l+g
  Peinf101Scf00145g09001.1 46 SVYRGIR--KRNGKWASEIREPR----TtTRIWLGTYPTPEMAAAAYDVAGLALKG 95
                              78****6..779*********94....25*******************99777766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.23E-2646105No hitNo description
SuperFamilySSF541714.25E-1746105IPR016177DNA-binding domain
PfamPF008478.7E-94695IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-2547104IPR001471AP2/ERF domain
PROSITE profilePS5103219.96847103IPR001471AP2/ERF domain
SMARTSM003806.1E-2547109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MASPNYEASH KNNLPFPFQN TSHNVNHCPT SSTIPNKSQH SSRRHSVYRG IRKRNGKWAS  60
EIREPRTTTR IWLGTYPTPE MAAAAYDVAG LALKGSDTPL NFPSSINSYT MPASLTAADV  120
RAAAANAAAA AAVRAPAAQI ELSDEVPAAR PGQEFFDEEE MFNMPKLLDD MAEAMLVSRP  180
FYDELPENSD AADTLWSYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-12451071276Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016465556.11e-60PREDICTED: ethylene-responsive transcription factor ERF025-like
SwissprotQ9FJ901e-42ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A1S3ZMF62e-59A0A1S3ZMF6_TOBAC; ethylene-responsive transcription factor ERF025-like
STRINGXP_009767038.17e-60(Nicotiana sylvestris)
STRINGXP_009767039.17e-60(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-36ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]