PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00094g12001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 226aa    MW: 25247 Da    PI: 9.7907
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00094g12001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37.1e-1796146255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y GVr++  +g ++AeIrdp     kr+r +lg+++t+e+Aa a+++a+ k++g
  Peinf101Scf00094g12001.1  96 RYIGVRRRQ-WGTFAAEIRDP---ErKRARLWLGTYDTPEDAALAYDQAAFKFRG 146
                               699***887.**********7...3347************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.22E-2196155IPR016177DNA-binding domain
PROSITE profilePS5103223.07796154IPR001471AP2/ERF domain
CDDcd000186.23E-2896156No hitNo description
PfamPF008477.0E-1296146IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.9E-3096155IPR001471AP2/ERF domain
SMARTSM003804.8E-3496160IPR001471AP2/ERF domain
PRINTSPR003671.5E-1097108IPR001471AP2/ERF domain
PRINTSPR003671.5E-10136156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MNNPVADETF SFPELDLLES IKQHLLNDSD FSDIFSHVIS SSNNAILPYS PSPSIGSSCP  60
SLESNEKSEF DDQEKITTKS PAVVERAANA PHDWRRYIGV RRRQWGTFAA EIRDPERKRA  120
RLWLGTYDTP EDAALAYDQA AFKFRGSKAR LNFPHLIGSS NTPNPARLTS RRPVRSPEPA  180
SSSSSSSSNS TTSSQNAGTR KRRIDLINSI ARAKRFCNSW NVQMLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2295159468ATERF1
3gcc_A2e-2295159468ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544939.12e-79PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404791e-34ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A1U8EM334e-78A0A1U8EM33_CAPAN; Ethylene-responsive transcription factor 2
TrEMBLA0A2G3AMD84e-78A0A2G3AMD8_CAPAN; ethylene-responsive transcription factor 2-like
STRINGPGSC0003DMT4000971012e-77(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.18e-36ethylene-responsive element binding factor 13
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]