PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00017g00014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 179aa    MW: 19843.4 Da    PI: 10.2128
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00017g00014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-20555155
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                              +++kGVr++  +g+Wv+eIr+p        kr++lg+f taeeAa+a+++a+  ++g
  Peinf101Scf00017g00014.1  5 KKFKGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEEAARAYDEAAILMNG 55
                              59*****999.**********8.....335**********************98876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.20E-33565No hitNo description
PfamPF008472.8E-12655IPR001471AP2/ERF domain
SMARTSM003804.8E-38669IPR001471AP2/ERF domain
PROSITE profilePS5103221.417663IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-20664IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.5E-32663IPR001471AP2/ERF domain
PRINTSPR003672.1E-10718IPR001471AP2/ERF domain
PRINTSPR003672.1E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MVQSKKFKGV RQRQWGSWVS EIRHPLLKKR IWLGTFETAE EAARAYDEAA ILMNGQVAKT  60
NFPIVKENPV NNNGNNNEKK FPLSSSTLST VLNAKLRKCC KDNPAPSMTC LRLDNDNCHI  120
GVWQKRSGKQ SGSNWLTKIE LGKKEETHQS HESMTSWSVS STSGSSTSSS SSGISDLGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-176631472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPromotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15319479}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By wounding in cauline leaves, stems, and siliques, but not in rosette leaves. {ECO:0000269|PubMed:15319479}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019260506.14e-97PREDICTED: ethylene-responsive transcription factor SHINE 3-like
RefseqXP_019260507.14e-97PREDICTED: ethylene-responsive transcription factor SHINE 3-like
SwissprotQ3E9582e-64SHN3_ARATH; Ethylene-responsive transcription factor SHINE 3
TrEMBLA0A314LDG88e-96A0A314LDG8_NICAT; Ethylene-responsive transcription factor shine 3
STRINGXP_009758054.14e-95(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13522476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.24e-54ERF family protein
Publications ? help Back to Top
  1. Djemal R,Khoudi H
    Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum).
    Protoplasma, 2015. 252(6): p. 1461-73
    [PMID:25687296]
  2. Sadler C, et al.
    Wax and cutin mutants of Arabidopsis: Quantitative characterization of the cuticular transport barrier in relation to chemical composition.
    Biochim. Biophys. Acta, 2016. 1861(9 Pt B): p. 1336-1344
    [PMID:26965486]