PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13207482g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 146aa    MW: 16708.6 Da    PI: 8.8131
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13207482g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.9e-192778256
                          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                                 +y+GVr+++ +g+++AeIrdp+++g  +r +lg+f tae+Aa+a+++ + +l+g+
  Peinf101Ctg13207482g00001.1 27 RYRGVRRRP-WGKFAAEIRDPTKQG--ARQWLGTFETAEDAARAYDKVAFNLRGH 78
                                 59*******.**********98865..**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-302787IPR001471AP2/ERF domain
PfamPF008473.0E-122778IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-222786IPR016177DNA-binding domain
PROSITE profilePS5103223.7362785IPR001471AP2/ERF domain
SMARTSM003809.3E-342791IPR001471AP2/ERF domain
CDDcd000185.06E-292786No hitNo description
PRINTSPR003679.3E-112839IPR001471AP2/ERF domain
PRINTSPR003679.3E-115167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MEGSTSEGKK AMQEKESSNK LGKEDIRYRG VRRRPWGKFA AEIRDPTKQG ARQWLGTFET  60
AEDAARAYDK VAFNLRGHLA TLNFPNEYYS HLSDPPFHYR TSFPSSNISS VHINPRNGNK  120
RSSSIGRDKE IIELEYLDDS VLEELL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-30161413114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009790228.12e-74PREDICTED: ethylene-responsive transcription factor ERF098-like
RefseqXP_016432408.12e-74PREDICTED: ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC52e-43ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A1J6KW577e-74A0A1J6KW57_NICAT; Ethylene-responsive transcription factor erf098
STRINGXP_009790228.17e-74(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-46ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]