PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg12847943g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NF-YA
Protein Properties Length: 109aa    MW: 11678.5 Da    PI: 10.0388
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg12847943g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA37.86.2e-121223758
                    CBFB_NFYA 37 pylheSRhkhAlrRpRgsgGrF 58
                                 pylheSRh+hAl+R+R+sgGrF
  Peinf101Ctg12847943g00002.1  1 PYLHESRHQHALKRARASGGRF 22
                                 8********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5115217.68125IPR001289Nuclear transcription factor Y subunit A
PfamPF020453.5E-9122IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
PYLHESRHQH ALKRARASGG RFARKSDADT SKGTSSGSAV SSQSRCSSGS EPLPSSTADV  60
PEKHNDGSLT ERQHSYSNGN GYGKKNSFHE SKYQPQSTHF GEGGSAIKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006366543.14e-48PREDICTED: nuclear transcription factor Y subunit A-1-like
TrEMBLM1AQ624e-48M1AQ62_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000277851e-47(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31112248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.39e-11nuclear factor Y, subunit A1