PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000722G0060
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family GeBP
Protein Properties Length: 219aa    MW: 23371.6 Da    PI: 7.0773
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000722G0060genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573491.7e-1521108396
           DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                      +q+lw++ De++lL G   f+a++g+ p   d+ a++e +++s+s++  +  +  K++rLK Kf +           +   +h++ + +l+  +
  PH01000722G0060  21 VQKLWTDADEVALLTGAAAFRARHGAAPRLpDMGALFESLRGSLSMHLDQAKVYYKLKRLKSKFLHSAPA-------ATGGPHERRVRDLCADL 107
                      79************************98877*********************************998877.......44556666666666666 PP

           DUF573  96 W 96 
                      W
  PH01000722G0060 108 W 108
                      6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.0E-1522109IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MAIAAPASFS AGGGGGGQGA VQKLWTDADE VALLTGAAAF RARHGAAPRL PDMGALFESL  60
RGSLSMHLDQ AKVYYKLKRL KSKFLHSAPA ATGGPHERRV RDLCADLWGA ELAPPVEADA  120
YAEEGDADEG YIGGDVEVAV RLPVVSEVLD EYWRRNARAL SGVSLEKGLA LLRAEEGRVA  180
ETKWRRQLGA EMRTQVRRHD LAKEVYGLLI DAVKGLGP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000722G0060
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003564112.17e-95STOREKEEPER protein
TrEMBLI1GZW52e-93I1GZW5_BRADI; Uncharacterized protein
STRINGBRADI1G46160.13e-94(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763