PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pahal.I03350.9
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family NAC
Protein Properties Length: 286aa    MW: 31622.8 Da    PI: 5.0537
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pahal.I03350.9genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.42.4e-09129100128
             NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                     +g+k +L fy+g+ap g++t Wvmhey++
  Pahal.I03350.9   1 MGMKIILQFYEGHAPCGKRTGWVMHEYQV 29 
                     59*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.714150IPR003441NAC domain
SuperFamilySSF1019411.18E-13150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MGMKIILQFY EGHAPCGKRT GWVMHEYQVE QNDEANLPQD YKSLCRVFFQ GDKKLDDKSQ  60
QNSLNVDAPN DRLETYLQYL AKLEEPKVTA DANEEDVCSS KVQFEQKPLS ALDDIDVIAT  120
GDYIELNDLL TSEASASTSE NSSKRSMVSE DYFDSDAFLR EILKGSNTTD GLNQDHKFSI  180
AAPTKSANVV LSPSEQGLVQ FHDNNGMVPG TSHQKPVPEG DRGEHSRQGF QQQGPSMSSY  240
FPSSHVKPSH SNSSSSSQSS MKSHKEQSTS KFGMIGKKYC CFGSF*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797455.10.0NAC domain-containing protein 76-like isoform X3
TrEMBLA0A2S3INC80.0A0A2S3INC8_9POAL; Uncharacterized protein
STRINGPavir.Ib03017.1.p0.0(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.14e-10NAC domain containing protein 52