PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pahal.A00946.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family BES1
Protein Properties Length: 385aa    MW: 38741.1 Da    PI: 10.3901
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pahal.A00946.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822153.61.5e-4747141497
          DUF822   4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslqss 97 
                      r p+ kErEnn+rRERrRR ++++i++GLRa+Gny lp ++DnneVl+ALc eAGw+ve+DGttyr+g++p+ +     g sa +sp ss+  +
  Pahal.A00946.1  47 VRVPSSKERENNRRRERRRRMVTSRIFSGLRAHGNYILPRHCDNNEVLRALCDEAGWIVEADGTTYRRGCRPPpHMRGGFGGSAPVSPGSSYPVT 141
                     589**********************************************************************666667899999*****99854 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.7E-4448140IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MNGEGMVGAG AGAGAGAGGS SGGGGDKGKG NGGAGNGCGA RGSMAPVRVP SSKERENNRR  60
RERRRRMVTS RIFSGLRAHG NYILPRHCDN NEVLRALCDE AGWIVEADGT TYRRGCRPPP  120
HMRGGFGGSA PVSPGSSYPV TPTAPYGLGS GSPYLTLGGG GGLFYGAAGR AEAGSHGLAD  180
WFRRLPGAPD GGASSSSAPV TPQNGSPPQS MLARWAAENN AAAGASNLQP RRAAGLSLYA  240
SQQRPMPITM PPSPVSGGAP VANAVDPMRL LAGIQRSTAA AAAAAAANNN RVRAYSPLGT  300
PVRPSLFVAG APSSMLRAPG PVQGSGGQWA APAPAARAGG GGDVEMAPRE FSFAWEGEAV  360
SQDYADEDAL ELTLGNSRTR ADRA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-2168120392444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-2168120392444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-2168120392444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-2168120392444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025819084.10.0protein BZR1 homolog 4-like
TrEMBLA0A2S3GMV60.0A0A2S3GMV6_9POAL; Uncharacterized protein
STRINGPavir.Aa02766.1.p1e-148(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1866659
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-26BES1/BZR1 homolog 4