PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl017925
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 284aa    MW: 32417.5 Da    PI: 8.6565
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55342620PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM139.32.3e-43201462128
        NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 pGfrF Pt+eelv +yLkk+v+g + l+++ +i+++d+y+++Pw+Lp  +++ +ek+w+fF++r++k+    r++r t sgyWkatg+d+ + +k  e 
  Pgl017925  20 IPGFRFYPTEEELVGFYLKKRVQGGHqLNFDIIIPTLDLYRYDPWELPgLAIDVGEKQWFFFVPRESKKC--ARPTRLTVSGYWKATGSDRGIRNKLLEC 117
                59*********************9985666556***************778999***********99875..7**********************99999 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                +g+kktLvfykg+ap g++tdW+m+eyr+
  Pgl017925 118 IGVKKTLVFYKGKAPLGQRTDWIMNEYRM 146
                ***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-4612168IPR003441NAC domain
PROSITE profilePS5100550.54619168IPR003441NAC domain
PfamPF023652.7E-2421146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAIVEEMYND GALQGELTAI PGFRFYPTEE ELVGFYLKKR VQGGHQLNFD IIIPTLDLYR  60
YDPWELPGLA IDVGEKQWFF FVPRESKKCA RPTRLTVSGY WKATGSDRGI RNKLLECIGV  120
KKTLVFYKGK APLGQRTDWI MNEYRMPELS SSPPKKKMDM VLCRIYKKAA SQKSMEQRTQ  180
SVRVEKGKLV VSARDEYEEK CHSISLYGSS CQSSLMTEAK VPTSCHNEKQ KGVCSSNFSK  240
MNNEAIQFKC LEPIMSSEER LVLNVGGIVP TQNYIELCEC TVNR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-431617314170NO APICAL MERISTEM PROTEIN
1ut4_B6e-431617314170NO APICAL MERISTEM PROTEIN
1ut7_A6e-431617314170NO APICAL MERISTEM PROTEIN
1ut7_B6e-431617314170NO APICAL MERISTEM PROTEIN
4dul_A6e-431617314170NAC domain-containing protein 19
4dul_B6e-431617314170NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020681077.16e-61NAC domain-containing protein 22
SwissprotQ10S651e-55NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A075M5N51e-111A0A075M5N5_9SPER; NAC domain protein
STRINGPavir.J01198.1.p9e-60(Panicum virgatum)
STRINGXP_008791987.13e-60(Phoenix dactylifera)
STRINGXP_008813634.14e-60(Phoenix dactylifera)
STRINGMLOC_65456.13e-59(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.11e-56NAC domain containing protein 35
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]