PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl016280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 284aa    MW: 32199.8 Da    PI: 7.6434
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55349454PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.82.4e-083331340
               HHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
     bZIP_1 13 NReAArrsRqRKkaeieeLee...kvkeLea 40
               NReAAr+sR+RKka++++Le    k ++Le+
  Pgl016280  3 NREAARKSRLRKKAYVQQLESsriKLAQLEQ 33
               *******************972224444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-6338No hitNo description
SuperFamilySSF579599.14E-6337No hitNo description
PfamPF141446.8E-3087162IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
ALNREAARKS RLRKKAYVQQ LESSRIKLAQ LEQELQRART QGVFLGSNGY LNDQGHLTGN  60
AVSNGSLTSA AAFDMEYQRW LEEHHRHMCD LRAALHEHLP DNDLRVFVEN CLAHYDDLLH  120
IKIVGAKADV FYLVSGMWKT PAERFFMWMG GFRPSEILKI LIPQIEPLTE QQYQCICSLQ  180
QSSLQAEEAF SQGMEELQHS ISENIAAGSL SSPSNMANYM GQMAIVMGKL ANLEILADSL  240
RHQTLQQLHR ILTTRQSAKS LLSIGEYCSR LRALSSLWSA RPRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.318430.0root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002975942.11e-139hypothetical protein SELMODRAFT_232668
RefseqXP_011625446.11e-138PREDICTED: transcription factor HBP-1b(c38)
SwissprotQ415581e-121HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0K0M7410.0A0A0K0M741_PINTB; ZIP2 (Fragment)
STRINGEFJ228471e-139(Selaginella moellendorffii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.52e-98TGACG motif-binding factor 6