PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl014294
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 162aa    MW: 18110.4 Da    PI: 10.6294
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-175a-Picea_glauca-37714PU_refplantGDBView CDS
gnl|UG|Pgl#S55339435PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.11.2e-1583144162
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                +ke kr +r+ +NR++A+  R+RKka++  Le++vke+e +N++L ++l++l++e + l++ 
  Pgl014294  83 DKEHKRLKRLLRNRVSAQQARERKKAYLSDLETRVKEIEHKNSELEERLSTLQNENQMLRQI 144
                5899*****************************************************99886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR000417.1E-58298IPR001630cAMP response element binding (CREB) protein
SMARTSM003381.5E-1583147IPR004827Basic-leucine zipper domain
PfamPF001702.0E-1484145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.47285148IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-1387145No hitNo description
Gene3DG3DSA:1.20.5.1708.2E-1787147No hitNo description
CDDcd147041.85E-1888139No hitNo description
PROSITE patternPS00036090105IPR004827Basic-leucine zipper domain
PRINTSPR000417.1E-5100120IPR001630cAMP response element binding (CREB) protein
PRINTSPR000417.1E-5120137IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MQDTAASTST QHQSTSEKSS SSAAPAQFRL AKDAIESDDD IRRVPEMGVM QAGPSTCLPM  60
RLDNPQPTTG VVAHKKRGRA PADKEHKRLK RLLRNRVSAQ QARERKKAYL SDLETRVKEI  120
EHKNSELEER LSTLQNENQM LRQILKNTTM KKKGSGNSGA ET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2oqq_A3e-16108147342Transcription factor HY5
2oqq_B3e-16108147342Transcription factor HY5
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.161430.0somatic embryo| stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010914895.12e-53PREDICTED: transcription factor HY5
RefseqXP_008785002.12e-53PREDICTED: transcription factor HY5-like isoform X2
SwissprotQ9SM501e-49HY5_SOLLC; Transcription factor HY5
TrEMBLA9NTI71e-115A9NTI7_PICSI; Putative uncharacterized protein
STRINGPOPTR_0018s01530.15e-51(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.11e-48bZIP family protein