PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl010835
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 313aa    MW: 35556.5 Da    PI: 7.7357
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-175a-Picea_glauca-32798PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1431.7e-44291553128
        NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                pGfrF Pt+eelv +yLkk+++g++ ++++ vi+++d+y+++P +Lp  +++ +e++w+fF++rd+k+++  r+nr tksgyWkatg+d+++ ++  + +
  Pgl010835  29 PGFRFYPTEEELVGFYLKKRIQGSHpMNFDIVIPTLDLYRYDPCELPsLAHDVGERQWFFFVPRDHKNSS-GRPNRLTKSGYWKATGSDRAIRNELLQCI 127
                9**********************995666666***************556677999**********9875.6**********************99999* PP

        NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                glkk+Lvfykg+ap g+ktdW+m+eyrl
  Pgl010835 128 GLKKILVFYKGKAPYGQKTDWIMNEYRL 155
                **************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100549.6127176IPR003441NAC domain
SuperFamilySSF1019415.49E-4728176IPR003441NAC domain
PfamPF023657.5E-2529155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
VQSQATRVND PSNKSPIGTV QEEFSMDLPG FRFYPTEEEL VGFYLKKRIQ GSHPMNFDIV  60
IPTLDLYRYD PCELPSLAHD VGERQWFFFV PRDHKNSSGR PNRLTKSGYW KATGSDRAIR  120
NELLQCIGLK KILVFYKGKA PYGQKTDWIM NEYRLPDLRS SSVKVRDIVL CRIYRKAASQ  180
KSMELQAKPD HVVKEETAVS GDEYEDTSYS TTLNDGGQLS NPMKEIEVSS LYYQKRERVC  240
SSDQSKTNNG DSLYECLEPI MLSEETRVLK NPKACKTALL ELPNMSLNCP LSQPIATPPA  300
LLSTPPPFQP SLI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-462918119170NO APICAL MERISTEM PROTEIN
1ut4_B6e-462918119170NO APICAL MERISTEM PROTEIN
1ut7_A6e-462918119170NO APICAL MERISTEM PROTEIN
1ut7_B6e-462918119170NO APICAL MERISTEM PROTEIN
3swm_A5e-462918122173NAC domain-containing protein 19
3swm_B5e-462918122173NAC domain-containing protein 19
3swm_C5e-462918122173NAC domain-containing protein 19
3swm_D5e-462918122173NAC domain-containing protein 19
3swp_A5e-462918122173NAC domain-containing protein 19
3swp_B5e-462918122173NAC domain-containing protein 19
3swp_C5e-462918122173NAC domain-containing protein 19
3swp_D5e-462918122173NAC domain-containing protein 19
4dul_A6e-462918119170NAC domain-containing protein 19
4dul_B6e-462918119170NAC domain-containing protein 19
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.183820.0stem
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008813634.19e-64NAC domain-containing protein 22-like isoform X1
SwissprotQ10S652e-57NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A075M5N51e-133A0A075M5N5_9SPER; NAC domain protein
STRINGXP_008813634.14e-63(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.12e-58NAC domain containing protein 35
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]