PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl006721
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Dof
Protein Properties Length: 228aa    MW: 24488.4 Da    PI: 7.5316
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-175a-Picea_glauca-23553PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof45.41.7e-142303462
     zf-Dof 34 kaCrryWtkGGalrnvPvGggrrknkkss 62
               k+CrryWtkGG+lr vPvGgg+rkn k++
  Pgl006721  2 KTCRRYWTKGGSLRSVPVGGGCRKNSKRN 30
               89***********************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027011.2E-9228IPR003851Zinc finger, Dof-type
ProDomPD0074783.0E-6223IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
XKTCRRYWTK GGSLRSVPVG GGCRKNSKRN NSSNNNGKRS NGEACSSATG SDQLSPSLGG  60
VSNDCKYYNG DGEELIGINY VNSLRQVDHE AAFAGCSINS GVYGIQANDH QSSQSFQPYH  120
LPTALQSLQG SLIQAPNGFN QAANRGDLGL VQQQAAGAVS YDREAYHPYI NMSLDHSDGH  180
SRAPQQHKSN NIIENPPQGL VYEGGYWNGG VWPDLSAYGL SNINPNSM
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.58470.0root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NNI11e-165A9NNI1_PICSI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.19e-09Dof family protein