PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG030754.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family C2H2
Protein Properties Length: 382aa    MW: 42597.7 Da    PI: 8.1393
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG030754.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.3e-05146169123
                  EEETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                  ++C+ Cg+ F  + +L++H+ t H
  CCG030754.1 146 FPCTACGEIFQKPQLLEQHQATkH 169
                  89******************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.598146174IPR007087Zinc finger, C2H2
PROSITE patternPS000280148169IPR007087Zinc finger, C2H2
SuperFamilySSF563999.21E-14171381No hitNo description
Gene3DG3DSA:3.90.228.104.7E-4173286IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.101.4E-4316381IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MAPNIGSVFN KFLSLFILLL HLGCFIFTTE LDDHHLNNPP PTKKRKKVSP LAPISSSPSR  60
LKSHKALSSS WSYLKSIFSS KSSKPQTQSG TPTLTSARSS QQSIVPTIPP ETHLPELPPR  120
KKSSGSCEES DISTDHHFFP LRNDIFPCTA CGEIFQKPQL LEQHQATKHA VTQLLDGDSG  180
KNIVHIIFKT GWSSKEKSPE IHRILKIHNS PKILSRFEEY REFVRAKAAR NSKRGDERCI  240
ADGNELLRFY CSTFMCDLGL NEDSSICNQQ YCSVCGIIKS GFSPKMDGIS TLSTSWRAHM  300
AIPEEIEEEF KFMNVKRAML VCRVVAGRVG CDLEEDVDKQ DGGSDSVLGR GGSGVHTRLD  360
EEELLVFNPR AVLPCFVIVY TV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14246KKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011032141.10.0PREDICTED: uncharacterized protein LOC105131066
TrEMBLA0A2K1Z2M60.0A0A2K1Z2M6_POPTR; Uncharacterized protein
STRINGPOPTR_0009s04850.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106682936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-114C2H2 family protein