PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG026785.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family C2H2
Protein Properties Length: 433aa    MW: 47948.4 Da    PI: 9.342
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG026785.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.3e-05376396223
                  EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                  +C+ CgksF r++ L++H++++
  CCG026785.1 376 TCSQCGKSF-RPEKLHSHMKSC 396
                  6********.**********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF061369.9E-4024297IPR010369Protein of unknown function DUF966
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MEVASGIPTS CSSSGAGAGE VRRIHIIYFL SHNLGRIDQH PHLIRVHHSN RKGVYLRDVK  60
RWLADLRGKD LPKAFAWSYK RRYKKGYVWQ DLLDDDLITP ISDNEYVLKG SKILVPPANP  120
VVGSADGEKQ ENTGVELVEN KAQNHEQRPS PNQICKDTTS RNTSSTEIPK ESPTFSSEIS  180
TLTDDSIEEE EEEKEEDACK RNDSRDQEQI DNKVEHSSFY TIFLGKSKKN QDDRKDNTSS  240
IEKMGTPSSF PSPSSSQSTS TKSKSYSTGT SKVLRNLITC GAVDTNDAAL VLQSQKNKNK  300
YKPIDKPAGH ICKGEELGGS ARVFGTPWNQ VQQQRQHSTA NARKSFDGAR SSKKQHNGFG  360
SPKVVSSVYK PVAVPTCSQC GKSFRPEKLH SHMKSCRGLK VLAKAASTYV EKTPSPSHNP  420
VDSASMDGYF LTN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011009641.10.0PREDICTED: uncharacterized protein LOC105114701
TrEMBLA0A3N7EDR30.0A0A3N7EDR3_POPTR; Uncharacterized protein
STRINGPOPTR_0001s23880.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83781620